Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_05890 | Not Available | Negative | 1295135 - 1295593 | 16546.8 |
| rnd transporter | APR52_05895 | C6DBC6 | Positive | 1295817 - 1297007 | 41865.6 |
| acriflavine resistance protein b | APR52_05900 | C6CAI2 | Positive | 1297004 - 1300153 | 112827.0 |
| lysr family transcriptional regulator | APR52_05905 | Not Available | Negative | 1300169 - 1301095 | 34360.4 |
| lactam utilization protein lamb | APR52_05910 | Q9I626 | Positive | 1301318 - 1302091 | 27722.4 |
| hypothetical protein | APR52_05915 | P49786 | Positive | 1302142 - 1302390 | 8639.23 |
| acetyl-coa carboxylase biotin carboxylase subunit | APR52_05920 | Not Available | Positive | 1302404 - 1303810 | 49713.7 |
| allophanate hydrolase | APR52_05925 | Not Available | Positive | 1303807 - 1304715 | 33549.2 |
| allophanate hydrolase | APR52_05930 | Q7WY77 | Positive | 1304705 - 1305682 | 34314.5 |
| tmao reductase | APR52_05935 | P38683 | Positive | 1305743 - 1306825 | 38091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
