Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Base plate j protein | APR52_32715 | P44240 | Positive | 7082043 - 7083095 | 36593.5 |
| Tail protein | APR52_32720 | Not Available | Positive | 7083182 - 7083751 | 21150.2 |
| hypothetical protein | APR52_32725 | Not Available | Positive | 7083741 - 7085708 | 69656.5 |
| Putative tail-collar fiber protein | APR52_32730 | Not Available | Positive | 7085943 - 7086647 | 24393.5 |
| Tail fiber assembly like protein | APR52_32735 | Not Available | Positive | 7086656 - 7087135 | 16253.3 |
| Attr | Not Available | Not Available | Positive | 7090764 - 7090776 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 183 - 1725 | Not Available |
| hypothetical protein | APR52_00010 | Not Available | Positive | 714 - 1121 | 14472.8 |
| hypothetical protein | APR52_00015 | Not Available | Positive | 1114 - 1581 | 16820.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2313 - 5199 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
