Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c assembly protein | APR52_05840 | Not Available | Negative | 1282949 - 1283758 | 28703.7 |
| signal recognition particle | APR52_05845 | P0AGD9 | Positive | 1283885 - 1285273 | 49501.1 |
| metal-dependent phosphohydrolase | APR52_05850 | Not Available | Negative | 1285341 - 1286480 | 43155.6 |
| dna ligase | APR52_05855 | Not Available | Negative | 1286477 - 1287376 | 33109.3 |
| glucosyl transferase family 2 | APR52_05860 | Q8XVC2 | Negative | 1287696 - 1289699 | 73103.2 |
| hypothetical protein | APR52_05865 | Not Available | Negative | 1289705 - 1289911 | 7280.55 |
| response regulator glrr | APR52_05870 | P0AFU4 | Negative | 1290093 - 1291493 | 50695.1 |
| hypothetical protein | APR52_05875 | Not Available | Negative | 1291490 - 1292155 | 23658.6 |
| histidine kinase | APR52_05880 | P52101 | Negative | 1292219 - 1293643 | 52177.0 |
| (dimethylallyl)adenosine trna methylthiotransferase | APR52_05885 | A1TKI5 | Negative | 1293643 - 1295001 | 49995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
