Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | APR52_05790 | Q12EI9 | Positive | 1269818 - 1270702 | 31402.3 |
| hypothetical protein | APR52_05795 | Not Available | Positive | 1270791 - 1272254 | 52370.6 |
| sugar kinase | APR52_05800 | P83736 | Positive | 1272324 - 1273229 | 32245.6 |
| hypothetical protein | APR52_05805 | Not Available | Positive | 1273358 - 1273894 | 17267.0 |
| ribonucleotide-diphosphate reductase subunit beta | APR52_05810 | Q9Z6S4 | Negative | 1274049 - 1275269 | 46260.1 |
| ribonucleotide-diphosphate reductase subunit alpha | APR52_05815 | O84834 | Negative | 1275484 - 1278402 | 107679.0 |
| anhydro-n-acetylmuramyl-tripeptide amidase | APR52_05820 | P82974 | Negative | 1278755 - 1279375 | 22981.5 |
| fis family transcriptional regulator | APR52_05825 | Not Available | Negative | 1279362 - 1280948 | 56528.3 |
| histidine kinase | APR52_05830 | P33639 | Negative | 1280953 - 1282659 | 61645.3 |
| hypothetical protein | APR52_05835 | Not Available | Negative | 1282688 - 1282939 | 9117.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
