Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease tldd | APR52_05740 | P0AGG9 | Positive | 1259934 - 1261394 | 51454.1 |
| hypothetical protein | APR52_05745 | Not Available | Positive | 1261513 - 1262010 | 16885.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | APR52_05750 | P44303 | Positive | 1262273 - 1263391 | 40631.5 |
| hypothetical protein | APR52_05755 | Not Available | Negative | 1263396 - 1263902 | 18396.8 |
| hypothetical protein | APR52_05760 | Not Available | Negative | 1263917 - 1265218 | 46883.8 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | APR52_05765 | P37773 | Negative | 1265231 - 1266640 | 49974.8 |
| hypothetical protein | APR52_05770 | Not Available | Positive | 1266746 - 1267345 | 22137.3 |
| redoxin | APR52_05775 | Not Available | Positive | 1267342 - 1267887 | 19529.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | APR52_05780 | P0ABE0 | Positive | 1267988 - 1268449 | 15553.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | APR52_05785 | O52058 | Positive | 1268452 - 1269801 | 49489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
