Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_05690 | Not Available | Negative | 1249507 - 1250154 | 23754.8 |
| hypothetical protein | APR52_05695 | Not Available | Positive | 1250162 - 1250590 | 15395.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | APR52_05700 | Q2SZD0 | Negative | 1250535 - 1251278 | 27429.1 |
| shikimate dehydrogenase | APR52_05705 | A1TKF1 | Negative | 1251287 - 1252141 | 29405.1 |
| energy transducer tonb | APR52_05710 | Not Available | Negative | 1252185 - 1253036 | 31538.6 |
| ribonuclease ii | APR52_05715 | B7LRZ1 | Negative | 1253033 - 1255105 | 74415.4 |
| esterase | APR52_05720 | P0A8Z9 | Negative | 1255174 - 1255770 | 22389.8 |
| luxr family transcriptional regulator | APR52_05725 | Not Available | Positive | 1256087 - 1256812 | 25785.8 |
| histidine kinase | APR52_05730 | Not Available | Positive | 1256864 - 1258687 | 66707.8 |
| rod shape-determining protein roda | APR52_05735 | P44468 | Positive | 1258720 - 1259874 | 41253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
