Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | APR52_05490 | Not Available | Positive | 1205518 - 1206153 | 23455.0 |
| hypothetical protein | APR52_05495 | Not Available | Negative | 1206177 - 1206479 | 11216.4 |
| lysr family transcriptional regulator | APR52_05500 | P76369 | Negative | 1206565 - 1207482 | 33143.3 |
| quercetin 2,3-dioxygenase | APR52_05505 | Not Available | Positive | 1207676 - 1208395 | 26220.7 |
| chloroperoxidase | APR52_05510 | Not Available | Positive | 1208449 - 1209102 | 23119.8 |
| hypothetical protein | APR52_05515 | Not Available | Positive | 1209144 - 1209431 | 10213.7 |
| amidohydrolase | APR52_05520 | O34355 | Positive | 1209512 - 1211419 | 69679.9 |
| doxx family protein | APR52_05525 | Not Available | Positive | 1211425 - 1211823 | 14373.8 |
| mfs transporter | APR52_05530 | Not Available | Positive | 1211816 - 1213402 | 56135.3 |
| arylesterase | APR52_05535 | P22862 | Positive | 1213454 - 1214275 | 29896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
