Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | APR52_05390 | Not Available | Negative | 1184249 - 1185013 | 27390.6 |
| hypothetical protein | APR52_05395 | Not Available | Positive | 1185180 - 1185392 | 7551.37 |
| sodium:solute symporter | APR52_05400 | O07556 | Positive | 1185389 - 1186864 | 51800.6 |
| cytosine deaminase | APR52_05405 | O52063 | Positive | 1186897 - 1188099 | 42821.6 |
| cyanate permease | APR52_05410 | P17583 | Positive | 1188096 - 1189367 | 43491.1 |
| cytosine deaminase | APR52_05415 | O34598 | Positive | 1189373 - 1189861 | 17418.7 |
| hypothetical protein | APR52_05420 | P09489 | Positive | 1190144 - 1193947 | 128307.0 |
| hypothetical protein | APR52_05425 | Not Available | Positive | 1194075 - 1194332 | 8705.31 |
| 4-oxalocrotonate tautomerase | APR52_05430 | P45418 | Negative | 1194364 - 1194606 | 8775.32 |
| 3-oxoacyl-acp reductase | APR52_05435 | C8WJW0 | Negative | 1194618 - 1195379 | 25840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
