Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_32665 | Not Available | Positive | 7073124 - 7073735 | 22639.7 |
| hypothetical protein | APR52_32670 | Not Available | Positive | 7073732 - 7073950 | 7972.65 |
| Tail sheath protein | APR52_32675 | P44233 | Positive | 7073981 - 7075453 | 52002.2 |
| hypothetical protein | APR52_32680 | Not Available | Positive | 7075472 - 7075822 | 12231.3 |
| hypothetical protein | APR52_32685 | Not Available | Positive | 7075912 - 7076235 | 11151.2 |
| Bacteriophage tail length determination protein | APR52_32690 | Q6QIA5 | Positive | 7076408 - 7078444 | 71777.8 |
| Tail/dna circulation protein | APR52_32695 | Not Available | Positive | 7078444 - 7079685 | 44269.0 |
| Baseplate assembly protein | APR52_32700 | P08558 | Positive | 7079682 - 7080833 | 42428.4 |
| Putative baseplate assembly protein | APR52_32705 | Q9T1V4 | Positive | 7080833 - 7081507 | 24247.9 |
| Tail protein | APR52_32710 | P44239 | Positive | 7081565 - 7081969 | 15094.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
