Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_05090 | P32482 | Positive | 1117561 - 1118691 | 38958.3 |
| short-chain dehydrogenase | APR52_05095 | P16543 | Positive | 1118702 - 1119463 | 26531.8 |
| gcn5 family acetyltransferase | APR52_05100 | Not Available | Negative | 1119513 - 1119968 | 16767.1 |
| hypothetical protein | APR52_05105 | Not Available | Positive | 1120157 - 1120402 | 8691.88 |
| nucleotide pyrophosphohydrolase | APR52_05110 | Not Available | Positive | 1121444 - 1122286 | 31545.6 |
| lysr family transcriptional regulator | APR52_05115 | P55619 | Negative | 1124195 - 1125097 | 33155.4 |
| nad(p)h dehydrogenase | APR52_05120 | A0A481WNM5 | Positive | 1125199 - 1126005 | 29674.2 |
| hypothetical protein | APR52_05125 | Not Available | Negative | 1126002 - 1127991 | 69891.5 |
| abc transporter substrate-binding protein | APR52_05130 | Not Available | Negative | 1128142 - 1129158 | 35949.8 |
| amp-dependent synthetase | APR52_05135 | Not Available | Negative | 1129235 - 1131196 | 68796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
