Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_05040 | Not Available | Negative | 1109211 - 1109522 | 11585.9 |
| hypothetical protein | APR52_05045 | Not Available | Negative | 1109549 - 1109788 | 9199.83 |
| hypothetical protein | APR52_05050 | Not Available | Negative | 1109874 - 1110617 | 25614.6 |
| aldehyde-activating protein | APR52_05055 | Not Available | Positive | 1110765 - 1111172 | 14733.8 |
| hypothetical protein | APR52_05060 | Not Available | Positive | 1111224 - 1111691 | 17287.6 |
| deaminase | APR52_05065 | Not Available | Negative | 1111731 - 1112384 | 23679.4 |
| hypothetical protein | APR52_05070 | Not Available | Positive | 1112603 - 1113346 | 27728.7 |
| glyoxalase | APR52_05075 | Not Available | Positive | 1113364 - 1113798 | 15519.0 |
| elongation factor tu | APR52_05080 | B8J1A0 | Negative | 1113878 - 1115074 | 42486.0 |
| hypothetical protein | APR52_05085 | Not Available | Positive | 1116695 - 1117252 | 19996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
