Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_04990 | Not Available | Positive | 1095632 - 1096627 | 36556.2 |
| oxidoreductase | APR52_04995 | P39333 | Negative | 1096628 - 1097368 | 24816.9 |
| tetr family transcriptional regulator | APR52_05000 | Q7WY76 | Negative | 1097449 - 1098027 | 20157.2 |
| indolepyruvate ferredoxin oxidoreductase | APR52_05005 | Q9UZ56 | Negative | 1098102 - 1101647 | 128083.0 |
| acetolactate synthase | APR52_05010 | P45261 | Negative | 1101778 - 1103628 | 65863.4 |
| asnc family transcriptional regulator | APR52_05015 | P45265 | Positive | 1103751 - 1104188 | 16718.3 |
| carboxylesterase | APR52_05020 | P37967 | Negative | 1104256 - 1106043 | 62538.4 |
| histidine kinase | APR52_05025 | Not Available | Positive | 1106372 - 1108342 | 72679.8 |
| hypothetical protein | APR52_05030 | Not Available | Negative | 1108362 - 1108784 | 14790.8 |
| hypothetical protein | APR52_05035 | Not Available | Negative | 1108784 - 1109041 | 8599.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
