Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_04940 | Not Available | Positive | 1083732 - 1084823 | 39389.9 |
| peptide abc transporter substrate-binding protein | APR52_04945 | Q8VQK3 | Positive | 1084930 - 1086480 | 56034.0 |
| peptide abc transporter | APR52_04950 | Q8FUX0 | Positive | 1086497 - 1087441 | 34356.5 |
| peptide abc transporter permease | APR52_04955 | Q8VQK5 | Positive | 1087441 - 1088253 | 28763.0 |
| peptide abc transporter atp-binding protein | APR52_04960 | P75796 | Positive | 1088250 - 1089917 | 60861.4 |
| acetyl esterase | APR52_04965 | Q8FK82 | Positive | 1089989 - 1090900 | 33277.9 |
| hypothetical protein | APR52_04970 | P21341 | Positive | 1090909 - 1091559 | 23979.7 |
| hypothetical protein | APR52_04975 | Not Available | Positive | 1091574 - 1093298 | 62402.6 |
| transporter | APR52_04980 | P76350 | Negative | 1093340 - 1094650 | 45632.9 |
| aldolase | APR52_04985 | Q988D0 | Negative | 1094647 - 1095363 | 26071.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
