Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | APR52_04890 | Q6XL52 | Negative | 1074470 - 1075255 | 27993.8 |
| mfs transporter | APR52_04895 | Not Available | Positive | 1075445 - 1076383 | 32829.1 |
| 2,4-dichlorophenoxyacetate dioxygenase | APR52_04900 | P10088 | Positive | 1076412 - 1077290 | 33249.5 |
| trna-dihydrouridine synthase a | APR52_04905 | Q8Z1T1 | Negative | 1077314 - 1078279 | 36370.8 |
| doxx family protein | APR52_04910 | Not Available | Positive | 1078576 - 1078989 | 14561.2 |
| hypothetical protein | APR52_04915 | P0A2R1 | Positive | 1079049 - 1079513 | 17007.5 |
| hypothetical protein | APR52_04920 | Not Available | Positive | 1079562 - 1079942 | 14310.9 |
| 6-aminohexanoate hydrolase | APR52_04925 | Not Available | Negative | 1079943 - 1081178 | 43916.0 |
| hypothetical protein | APR52_04930 | Not Available | Negative | 1081218 - 1082159 | 35933.9 |
| omega amino acid--pyruvate aminotransferase | APR52_04935 | Q9A3Q9 | Positive | 1082410 - 1083711 | 45841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
