Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp27 | APR52_32615 | Not Available | Positive | 7063850 - 7064389 | 19496.3 |
| Portal protein | APR52_32620 | Q9T1W6 | Positive | 7064416 - 7065873 | 55300.0 |
| Putative portal protein | APR52_32625 | P44225 | Positive | 7065993 - 7067606 | 59410.7 |
| Virion morphogenesis protein | APR52_32630 | Not Available | Positive | 7067946 - 7069082 | 40951.3 |
| Mu-like prophage i protein | APR52_32635 | Not Available | Positive | 7069129 - 7070190 | 37251.2 |
| Hypothetical protein | APR52_32640 | Not Available | Positive | 7070231 - 7070644 | 14134.4 |
| Mu-like prophage major head subunit gpt | APR52_32645 | P44227 | Positive | 7070670 - 7071560 | 33163.1 |
| hypothetical protein | APR52_32650 | Not Available | Positive | 7071598 - 7071837 | 8551.16 |
| Hypothetical protein | APR52_32655 | Not Available | Positive | 7072013 - 7072519 | 17862.1 |
| Phage virion morphogenesis family protein | APR52_32660 | Not Available | Positive | 7072516 - 7073124 | 22132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
