Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | APR52_04840 | P0AA72 | Negative | 1063122 - 1064027 | 31541.7 |
| arsr family transcriptional regulator | APR52_04845 | P96582 | Positive | 1064145 - 1064642 | 18247.2 |
| lactoylglutathione lyase | APR52_04850 | Not Available | Negative | 1064654 - 1065142 | 17626.4 |
| biotin synthase | APR52_04855 | A1TQ53 | Negative | 1065139 - 1066155 | 36462.9 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR52_04860 | Not Available | Negative | 1066170 - 1068218 | 74186.1 |
| methylmalonyl-coa carboxyltransferase | APR52_04865 | Q3J4E3 | Negative | 1068354 - 1069898 | 56466.2 |
| transporter | APR52_04870 | P37895 | Negative | 1069939 - 1070991 | 37201.8 |
| gnat family acetyltransferase | APR52_04875 | Not Available | Negative | 1070985 - 1071458 | 17854.6 |
| methylmalonyl-coa mutase | APR52_04880 | Q3J4D7 | Negative | 1071467 - 1073629 | 77846.8 |
| gntr family transcriptional regulator | APR52_04885 | Not Available | Positive | 1073788 - 1074429 | 23900.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
