Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | APR52_04790 | A9AGU6 | Negative | 1053314 - 1053832 | 19502.8 |
| iron-sulfur cluster assembly protein | APR52_04795 | B7UGX4 | Negative | 1053896 - 1054219 | 11810.1 |
| scaffolding protein | APR52_04800 | P0ACD6 | Negative | 1054221 - 1054634 | 14306.0 |
| cysteine desulfurase iscs | APR52_04805 | Q47EN5 | Negative | 1054676 - 1055896 | 44941.0 |
| dna-binding protein | APR52_04810 | Q2NS30 | Negative | 1056005 - 1056541 | 19389.6 |
| excinuclease abc subunit b | APR52_04815 | Q8Y0N2 | Negative | 1056781 - 1058901 | 79696.4 |
| aromatic amino acid aminotransferase | APR52_04820 | P72173 | Positive | 1059007 - 1060203 | 42586.3 |
| esterase | APR52_04825 | Not Available | Positive | 1060370 - 1061821 | 54215.6 |
| ferredoxin | APR52_04830 | A1K5F2 | Positive | 1061841 - 1062473 | 22266.5 |
| lysine transporter lyse | APR52_04835 | Not Available | Positive | 1062470 - 1063108 | 22265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
