Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase | APR52_04740 | Q129M0 | Negative | 1045693 - 1046409 | 24964.1 |
| dihydroorotate dehydrogenase (quinone) | APR52_04745 | Q129L9 | Positive | 1046453 - 1047541 | 38390.2 |
| hypothetical protein | APR52_04750 | Not Available | Negative | 1047587 - 1048300 | 26531.4 |
| hypothetical protein | APR52_04755 | Not Available | Negative | 1048328 - 1048624 | 10314.4 |
| fad-dependent oxidoreductase | APR52_04760 | A0A0M7LBC1 | Negative | 1048773 - 1049879 | 38181.9 |
| stereocilin | APR52_04765 | Not Available | Negative | 1049914 - 1050042 | 4188.77 |
| Trna-val | Not Available | Not Available | Positive | 1050204 - 1050278 | Not Available |
| dna polymerase iii subunit epsilon | APR52_04775 | Q9CPE0 | Negative | 1050364 - 1051071 | 26078.0 |
| 2fe-2s ferredoxin | APR52_04780 | Q51383 | Negative | 1051071 - 1051409 | 12191.3 |
| molecular chaperone hsca | APR52_04785 | C5CXC5 | Negative | 1051448 - 1053307 | 65113.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
