Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase nlp/p60 | APR52_04690 | P76190 | Positive | 1031008 - 1031589 | 21093.0 |
| dihydrolipoamide dehydrogenase | APR52_04695 | P0A9P2 | Negative | 1031698 - 1033518 | 62852.1 |
| mfs transporter | APR52_04700 | Not Available | Negative | 1033515 - 1034108 | 21677.8 |
| dihydrolipoamide acetyltransferase | APR52_04705 | Q59098 | Negative | 1034164 - 1035855 | 57276.8 |
| pyruvate dehydrogenase | APR52_04710 | Not Available | Negative | 1035905 - 1038631 | 101519.0 |
| histidine kinase | APR52_04715 | P23222 | Positive | 1038847 - 1041387 | 94529.5 |
| luxr family transcriptional regulator | APR52_04720 | Not Available | Positive | 1041384 - 1042016 | 23241.2 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | APR52_04725 | C5CXD8 | Positive | 1042097 - 1042948 | 29510.1 |
| oligopeptidase a | APR52_04730 | P27237 | Positive | 1042954 - 1045011 | 76129.8 |
| glutaredoxin | APR52_04735 | Not Available | Positive | 1045042 - 1045692 | 22835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
