Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase subunit e1 | APR52_04640 | Q59106 | Negative | 1017361 - 1020237 | 106319.0 |
| propionate--coa ligase | APR52_04645 | P55912 | Negative | 1020418 - 1022331 | 69261.2 |
| hypothetical protein | APR52_04650 | Not Available | Negative | 1022442 - 1023215 | 28106.5 |
| laci family transcriptional regulator | APR52_04655 | Not Available | Positive | 1023320 - 1024324 | 35331.7 |
| fumarate reductase | APR52_04660 | Not Available | Positive | 1024416 - 1025753 | 47918.9 |
| isochorismatase | APR52_04665 | Q5U3Z3 | Negative | 1025766 - 1026368 | 22053.6 |
| tetr family transcriptional regulator | APR52_04670 | Not Available | Negative | 1026447 - 1027070 | 22787.5 |
| 4-hydroxyphenylacetate 3-hydroxylase | APR52_04675 | A4IT51 | Positive | 1027202 - 1028854 | 59584.8 |
| esterase | APR52_04680 | Not Available | Positive | 1028851 - 1029642 | 28593.5 |
| hypothetical protein | APR52_04685 | P75804 | Negative | 1029646 - 1030725 | 38728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
