Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein b | APR52_04590 | Q83CP9 | Negative | 1006446 - 1007339 | 32256.6 |
| pseudouridine synthase | APR52_04595 | Q8XYX8 | Negative | 1007476 - 1008501 | 37018.6 |
| competence protein coml | APR52_04600 | Q9JVB7 | Positive | 1008516 - 1009319 | 30085.5 |
| helicase | APR52_04605 | P76257 | Negative | 1009400 - 1011547 | 77816.0 |
| hypothetical protein | APR52_04610 | Not Available | Negative | 1011559 - 1011762 | 7724.35 |
| serine/threonine protein phosphatase | APR52_04615 | Not Available | Positive | 1011877 - 1012644 | 27905.4 |
| hypothetical protein | APR52_04620 | Not Available | Negative | 1012676 - 1013341 | 25100.2 |
| atpase | APR52_04625 | P64613 | Negative | 1013338 - 1014435 | 42165.0 |
| dihydrolipoamide dehydrogenase | APR52_04630 | P52992 | Negative | 1014509 - 1015939 | 50157.1 |
| dihydrolipoamide succinyltransferase | APR52_04635 | P52993 | Negative | 1015954 - 1017222 | 43815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
