Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | APR52_04540 | Not Available | Positive | 994926 - 996023 | 42165.0 |
| hypothetical protein | APR52_04545 | Not Available | Positive | 996020 - 996685 | 25100.2 |
| serine/threonine protein phosphatase | APR52_04550 | Not Available | Negative | 996717 - 997484 | 27905.4 |
| hypothetical protein | APR52_04555 | Not Available | Positive | 997599 - 997802 | 7724.35 |
| helicase | APR52_04560 | Not Available | Positive | 997814 - 999961 | 77816.0 |
| competence protein coml | APR52_04565 | Not Available | Negative | 1000042 - 1000845 | 30085.5 |
| pseudouridine synthase | APR52_04570 | Not Available | Positive | 1000860 - 1001885 | 37018.6 |
| segregation and condensation protein b | APR52_04575 | Not Available | Positive | 1002022 - 1002915 | 32256.6 |
| pseudouridine synthase | APR52_04580 | Not Available | Positive | 1002912 - 1004726 | 65237.9 |
| pseudouridine synthase | APR52_04585 | Q8X4Q8 | Negative | 1004635 - 1006449 | 65237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
