Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-hydroxylase | APR52_04490 | Not Available | Negative | 980507 - 982159 | 59584.8 |
| tetr family transcriptional regulator | APR52_04495 | Not Available | Positive | 982291 - 982914 | 22787.5 |
| isochorismatase | APR52_04500 | Not Available | Positive | 982993 - 983595 | 22053.6 |
| fumarate reductase | APR52_04505 | Not Available | Negative | 983608 - 984945 | 47918.9 |
| laci family transcriptional regulator | APR52_04510 | Not Available | Negative | 985037 - 986041 | 35331.7 |
| hypothetical protein | APR52_04515 | Not Available | Positive | 986146 - 986919 | 28106.5 |
| propionate--coa ligase | APR52_04520 | Not Available | Positive | 987030 - 988943 | 69261.2 |
| 2-oxoglutarate dehydrogenase subunit e1 | APR52_04525 | Not Available | Positive | 989124 - 992000 | 106319.0 |
| dihydrolipoamide succinyltransferase | APR52_04530 | Not Available | Positive | 992139 - 993407 | 43815.0 |
| dihydrolipoamide dehydrogenase | APR52_04535 | Not Available | Positive | 993422 - 994852 | 50157.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
