Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | APR52_04440 | Not Available | Negative | 966413 - 967264 | 29510.1 |
| luxr family transcriptional regulator | APR52_04445 | Not Available | Negative | 967345 - 967977 | 23241.2 |
| histidine kinase | APR52_04450 | Not Available | Negative | 967974 - 970514 | 94529.5 |
| pyruvate dehydrogenase | APR52_04455 | Not Available | Positive | 970730 - 973456 | 101519.0 |
| dihydrolipoamide acetyltransferase | APR52_04460 | Not Available | Positive | 973506 - 975197 | 57276.8 |
| mfs transporter | APR52_04465 | Not Available | Positive | 975253 - 975846 | 21677.8 |
| dihydrolipoamide dehydrogenase | APR52_04470 | Not Available | Positive | 975843 - 977663 | 62852.1 |
| hydrolase nlp/p60 | APR52_04475 | Not Available | Negative | 977772 - 978353 | 21093.0 |
| hypothetical protein | APR52_04480 | Not Available | Positive | 978636 - 979715 | 38728.0 |
| esterase | APR52_04485 | Not Available | Negative | 979719 - 980510 | 28593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
