Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | APR52_04390 | Not Available | Positive | 958290 - 958997 | 26078.0 |
| Trna-val | Not Available | Not Available | Positive | 959083 - 959157 | Not Available |
| stereocilin | APR52_04400 | Not Available | Positive | 959319 - 959447 | 4188.77 |
| fad-dependent oxidoreductase | APR52_04405 | Not Available | Positive | 959482 - 960588 | 38181.9 |
| hypothetical protein | APR52_04410 | Not Available | Positive | 960737 - 961033 | 10314.4 |
| hypothetical protein | APR52_04415 | Not Available | Positive | 961061 - 961774 | 26531.4 |
| dihydroorotate dehydrogenase (quinone) | APR52_04420 | Not Available | Negative | 961820 - 962908 | 38390.2 |
| ribose 5-phosphate isomerase | APR52_04425 | Not Available | Positive | 962952 - 963668 | 24964.1 |
| glutaredoxin | APR52_04430 | Not Available | Negative | 963669 - 964319 | 22835.1 |
| oligopeptidase a | APR52_04435 | Not Available | Negative | 964350 - 966407 | 76129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
