Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative repressor | APR52_20850 | P03034 | Positive | 4486026 - 4486484 | 16805.7 |
| Attl | Not Available | Not Available | Positive | 7052977 - 7052989 | Not Available |
| Integrase | APR52_32575 | Not Available | Negative | 7056997 - 7058916 | 70662.1 |
| hypothetical protein | APR52_32580 | Not Available | Positive | 7060284 - 7060610 | 12254.6 |
| Endolysin gp23 | APR52_32585 | Not Available | Positive | 7061010 - 7061474 | 17127.7 |
| hypothetical protein | APR52_32590 | Not Available | Negative | 7061514 - 7061990 | 17196.5 |
| Hypothetical protein | APR52_32595 | Not Available | Positive | 7062080 - 7062586 | 18528.2 |
| hypothetical protein | APR52_32600 | Not Available | Positive | 7062583 - 7063179 | 20921.3 |
| hypothetical protein | APR52_32605 | Not Available | Positive | 7063176 - 7063526 | 12775.4 |
| Hypothetical protein | APR52_32610 | Not Available | Positive | 7063523 - 7063846 | 12450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
