Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | strain HB13667 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Viridiplantae, Triticum aestivum |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Animal |
Gene Summary
Adenine Count
1184198 bp
Thymine Count
1191452 bp
Guanine Count
1977292 bp
Cytosine Count
1972560 bp
Genome Length
6325504 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | HB13667_03495 | Q52671 | Positive | 757179 - 758420 | 45346.6 |
| sarcosine oxidase subunit delta | HB13667_03500 | Q46336 | Positive | 758433 - 758738 | 11540.4 |
| aminomethyltransferase | HB13667_03505 | O87386 | Positive | 758735 - 761638 | 105213.0 |
| sarcosine oxidase | HB13667_03510 | Not Available | Positive | 761642 - 762247 | 21713.0 |
| lysr family transcriptional regulator | HB13667_03515 | P43011 | Negative | 762484 - 763368 | 32754.7 |
| alpha/beta hydrolase | HB13667_03520 | Q5UQ83 | Positive | 763514 - 764533 | 36403.6 |
| quercetin 2,3-dioxygenase | HB13667_03525 | P73623 | Positive | 764588 - 765310 | 26816.7 |
| hypothetical protein | HB13667_03530 | Not Available | Negative | 765437 - 765730 | 11004.9 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | HB13667_03535 | Not Available | Positive | 765809 - 766930 | 40543.7 |
| abc transporter substrate-binding protein | HB13667_03540 | Not Available | Positive | 767285 - 768310 | 37165.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Nosocomial infections | Causes | PMC11585281 |
| Nosocomial infections | Causes | PMC13243026 |






