Methylobacterium sp. GXS13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. GXS13 is characterized as a rod-shaped bacterium, which is indicative of its morphological structure. This organism possesses flagella, suggesting that it is motile and capable of movement in its environment. Importantly, Methylobacterium sp. GXS13 contains a single replicon, which is significant for its genetic organization and replication process. The strain is cataloged under the accession number LKKO00000000.1, providing a unique identifier for researchers interested in its genomic data. This accession number allows for further exploration of its genetic makeup and potential applications in various fields. Methylobacterium species are known for their ability to utilize methanol as a carbon source, which plays a crucial role in the carbon cycle. The presence of flagella in Methylobacterium sp. GXS13 may facilitate its mobility toward methanol-rich environments, enhancing its ecological role in methanol degradation and contributing to soil health and nutrient cycling. This motility, combined with its rod shape, may also influence its interactions within microbial communities, potentially affecting plant-microbe interactions and promoting plant growth through beneficial associations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. GXS13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. GXS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. GXS13 contigs99, whole genome shotgun

Gene Summary

Adenine Count

915242 bp

Thymine Count

913653 bp

Guanine Count

1989411 bp

Cytosine Count

1986987 bp

Genome Length

5805293 bp

Protein-coding Genes

5152 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin deaminaseAO398_23350Not AvailableNegative4153351 - 415398922852.2
glutamine synthetaseAO398_23355P05457Negative4155231 - 415664052355.1
transcriptional regulatorAO398_23365Q98N18Negative4158657 - 415899512241.9
copper oxidaseAO398_23375Q55P57Negative4160688 - 416218753731.9
Trna-leuNot AvailableNot AvailablePositive4162348 - 4162432Not Available
trigger factorAO398_23385B1LV84Positive4162574 - 416399552079.2
atp-dependent clp protease proteolytic subunitAO398_23390B1LW28Positive4164121 - 416474723012.7
atp-dependent clp protease atp-binding subunit clpxAO398_23395B1LW29Positive4164932 - 416620346466.9
dna-binding proteinAO398_23400A8HYF7Positive4166454 - 416888389323.6
asp/glu racemaseAO398_23405Not AvailablePositive4168953 - 416968124353.5

Displaying genes 3771 – 3780 of 5218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

364 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 364 metabolites

Health Effects

No health effects information available for this bacterium.