Methylobacterium sp. GXS13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

Methylobacterium sp. GXS13 is characterized as a rod-shaped bacterium, which is indicative of its morphological structure. This organism possesses flagella, suggesting that it is motile and capable of movement in its environment. Importantly, Methylobacterium sp. GXS13 contains a single replicon, which is significant for its genetic organization and replication process. The strain is cataloged under the accession number LKKO00000000.1, providing a unique identifier for researchers interested in its genomic data. This accession number allows for further exploration of its genetic makeup and potential applications in various fields. Methylobacterium species are known for their ability to utilize methanol as a carbon source, which plays a crucial role in the carbon cycle. The presence of flagella in Methylobacterium sp. GXS13 may facilitate its mobility toward methanol-rich environments, enhancing its ecological role in methanol degradation and contributing to soil health and nutrient cycling. This motility, combined with its rod shape, may also influence its interactions within microbial communities, potentially affecting plant-microbe interactions and promoting plant growth through beneficial associations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium sp. GXS13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylobacterium sp. GXS13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylobacterium sp. GXS13 contigs99, whole genome shotgun

Gene Summary

Adenine Count

915242 bp

Thymine Count

913653 bp

Guanine Count

1989411 bp

Cytosine Count

1986987 bp

Genome Length

5805293 bp

Protein-coding Genes

5152 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar biosynthesis protein flgeAO398_06600Q9X5Y0Negative3833531 - 383491046618.9
blue light sensor proteinAO398_06605Not AvailablePositive3835208 - 383567517653.2
response regulator receiver proteinAO398_06610Q93P00Positive3835684 - 383614217011.9
peptide chain release factor 3AO398_06615Q3SK69Negative3836272 - 383788559534.2
threonine aldolaseAO398_06620O50584Negative3838131 - 383917737525.4
30s ribosomal protein s21AO398_06625B8INF6Positive3839500 - 383983512363.2
response regulator receiver proteinAO398_06630Not AvailableNegative3840238 - 384063013865.6
glutamine amidotransferaseAO398_06635P54004Positive3840951 - 384173928692.0
aldehyde dehydrogenaseAO398_06640Q1JUP4Positive3841841 - 384327450982.9
slyx proteinAO398_06645Not AvailableNegative3843318 - 38435248040.4

Displaying genes 3491 – 3500 of 5218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

364 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 364 metabolites

Health Effects

No health effects information available for this bacterium.