Pseudomonas sp. TTU2014-105ASC

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. TTU2014-105ASC is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number LKKM00000000.1, which provides a reference for genetic and genomic studies. As part of the Pseudomonas genus, TTU2014-105ASC likely exhibits traits associated with this group, such as metabolic versatility and the ability to thrive in diverse habitats. Pseudomonas species are known for their roles in bioremediation, where they can degrade environmental pollutants, as well as their interactions with plant roots, potentially promoting growth or providing protection against pathogens. The presence of a single replicon may suggest a lack of plasmids, which can influence the organism's genetic stability and evolutionary dynamics. This trait could affect its ecological interactions, possibly making it more resilient to certain stresses while limiting its capacity to acquire additional traits through horizontal gene transfer. In summary, Pseudomonas sp. TTU2014-105ASC, with its single replicon and known accession, embodies traits typical of the Pseudomonas genus that suggest ecological versatility. Understanding its genetic makeup can provide insights into its potential applications in environmental management and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. TTU2014-105ASC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. TTU2014-105ASC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. TTU2014-105ASC scaffold_9, whole genome shotgun

Gene Summary

Adenine Count

854897 bp

Thymine Count

874452 bp

Guanine Count

1412407 bp

Cytosine Count

1379081 bp

Genome Length

4520837 bp

Protein-coding Genes

4049 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fis family transcriptional regulatorAO741_10660Not AvailableNegative3095687 - 309718654014.1
c4-dicarboxylate abc transporterAO741_10665Not AvailableNegative3097394 - 309876148359.4
c4-dicarboxylate abc transporter permeaseAO741_10670Not AvailableNegative3098778 - 309938022358.7
c4-dicarboxylate abc transporterAO741_10675Not AvailableNegative3099453 - 310053840120.4
merr family transcriptional regulatorAO741_10680Not AvailableNegative3100947 - 310134515219.5
acetyl-coa acetyltransferaseAO741_10685Not AvailableNegative3101423 - 310260440471.9
succinyl-coa--3-ketoacid-coa transferaseAO741_10690Not AvailableNegative3102862 - 310349122257.1
succinyl-coa--3-ketoacid-coa transferaseAO741_10695Not AvailableNegative3103496 - 310419125125.2
hydroxymethylglutaryl-coa lyaseAO741_10700Not AvailableNegative3104278 - 310517731470.7
3-methylcrotonyl-coa carboxylaseAO741_10705Not AvailableNegative3105471 - 310737268523.8

Displaying genes 2861 – 2870 of 4125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.