Pseudomonas marginalis ICMP 9505

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas marginalis ICMP 9505 is a Gram-negative bacterium characterized by its rod shape and aerobic metabolism. This organism thrives at an optimal temperature of 16°C and exhibits psychrotolerant capabilities, allowing it to grow in a temperature range suitable for cooler environments. The genome of Pseudomonas marginalis ICMP 9505 is represented by a single replicon, with the genomic data accessible under the accession number LKGY00000000.1. This genetic information may provide insights into its metabolic pathways and ecological roles. Given its psychrotolerant nature, Pseudomonas marginalis ICMP 9505 could be significant in biogeochemical processes in cold environments, such as polar regions or deep-sea ecosystems. Its ability to thrive in lower temperatures suggests a potential role in nutrient cycling and organic matter decomposition in these habitats, contributing to the overall microbial diversity and ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas marginalis
StrainICMP 9505

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas marginalis ICMP 9505
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas marginalis ICMP 9505 scaffold99, whole genome shotgun

Gene Summary

Adenine Count

1207296 bp

Thymine Count

1175274 bp

Guanine Count

1728059 bp

Cytosine Count

1782784 bp

Genome Length

5893550 bp

Protein-coding Genes

5014 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent metalloproteaseAO391_10905Not AvailableNegative1953644 - 195555469035.3
23s rrna methyltransferaseAO391_10910Not AvailableNegative1955755 - 195640523967.9
rna-binding proteinAO391_10915Not AvailablePositive1956511 - 195681911441.2
mfs transporterAO391_10920Not AvailableNegative1956843 - 195724714678.8
transcription elongation factor greaAO391_10925Not AvailableNegative1957276 - 195775217401.0
carbamoyl phosphate synthase large subunitAO391_10930Not AvailableNegative1957749 - 1960970117590.0
carbamoyl phosphate synthase small subunitAO391_10935Not AvailableNegative1961076 - 196221240716.4
4-hydroxy-tetrahydrodipicolinate reductaseAO391_10940Not AvailableNegative1962472 - 196327828323.3
molecular chaperone dnajAO391_10945Not AvailableNegative1963289 - 196441340292.4
molecular chaperone dnakAO391_10950Not AvailableNegative1964731 - 196664768386.3

Displaying genes 1711 – 1720 of 5171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.