Pseudomonas sp. ICMP 10191

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ICMP 10191 is characterized by having a single replicon, indicating a streamlined genetic structure. This trait may contribute to its adaptability and efficiency in various environments. The organism is cataloged under the accession number LKGW00000000.1, which serves as a unique identifier in genomic databases, facilitating further research and reference. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches. This particular strain, like others in the genus, may possess traits that allow it to utilize a wide range of substrates, potentially playing a significant role in biogeochemical cycles. The single replicon structure may also suggest a capacity for rapid adaptation to environmental changes, which is a hallmark of many Pseudomonas species. Understanding the genetic and metabolic capabilities of Pseudomonas sp. ICMP 10191 can provide insights into its ecological role, particularly in environments where it may contribute to processes such as nutrient cycling and degradation of pollutants. The presence of this strain in various ecosystems highlights the importance of Pseudomonas species in maintaining ecological balance and their potential applications in bioremediation and agriculture. Overall, further studies on this organism could elucidate its specific contributions to microbial communities and environmental health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ICMP 10191
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ICMP 10191
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ICMP 10191 scaffold99, whole genome shotgun

Gene Summary

Adenine Count

1196795 bp

Thymine Count

1247201 bp

Guanine Count

1815483 bp

Cytosine Count

1743495 bp

Genome Length

6003086 bp

Protein-coding Genes

4988 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspgAO388_10205P31734Positive5333237 - 533368916226.4
general secretion pathway protein gsphAO388_10210Not AvailablePositive5333734 - 533413214346.4
general secretion pathway protein gspiAO388_10215Not AvailablePositive5334132 - 533450313241.0
general secretion pathway protein gspjAO388_10220Not AvailablePositive5334500 - 533513222568.3
general secretion pathway protein gspkAO388_10225P34026Positive5335129 - 533586326384.1
general secretion pathway protein gsplAO388_10230Not AvailablePositive5335860 - 533695440411.4
general secretion pathway protein gspnAO388_10240Not AvailablePositive5337524 - 533805418804.6
type ii secretion system protein gspdAO388_10245P29041Positive5338054 - 534038182443.2
phospholipaseAO388_10250Not AvailablePositive5340455 - 534117426038.1
mfs transporterAO388_10255P96675Negative5341181 - 534238042126.5

Displaying genes 4591 – 4600 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 322 metabolites

Health Effects

No health effects information available for this bacterium.