Comamonas thiooxydans strain PHE2-6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas thiooxydans strain PHE2-6 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This strain has been documented under the accession number LKFB00000000.1 and contains a single replicon, which is relevant for its genetic stability and replication processes. The presence of flagella suggests that C. thiooxydans strain PHE2-6 can navigate its environment, which may be beneficial for colonization and interaction with other microbial communities or substrates. This motility can enhance its ecological role, potentially allowing it to exploit various ecological niches. In terms of its biological significance, Comamonas thiooxydans is known for its ability to oxidize sulfur compounds, which plays a crucial role in the sulfur cycle. The strain's specific adaptations, such as its rod shape and flagellar motility, may facilitate its ecological interactions in environments where sulfur compounds are prevalent. Overall, the traits of Comamonas thiooxydans strain PHE2-6 highlight its potential contributions to microbial ecosystems, particularly in sulfur-rich environments, where it may participate in biogeochemical cycling and influence the dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas thiooxydans
Strainstrain PHE2-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge; human gut; human intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas thiooxydans strain PHE2-6 contig90089, whole genome

Gene Summary

Adenine Count

1024974 bp

Thymine Count

1017257 bp

Guanine Count

1618464 bp

Cytosine Count

1645883 bp

Genome Length

5306578 bp

Protein-coding Genes

4567 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonoacetaldehyde hydrolaseATN89_23230Not AvailableNegative5108676 - 510953930459.6
alcohol dehydrogenaseATN89_23235Not AvailableNegative5109599 - 511068738031.8
phosphate abc transporter permeaseATN89_23240Not AvailableNegative5110807 - 511164330179.2
phosphonate abc transporter atp-binding proteinATN89_23245Not AvailableNegative5111640 - 511248530119.5
phosphonate abc transporter substrate-binding proteinATN89_23250Not AvailableNegative5112482 - 511335731202.6
lysr family transcriptional regulatorATN89_23255Not AvailablePositive5113527 - 511445933855.1
abc transporter substrate-binding proteinATN89_23260Not AvailablePositive5114612 - 511559235151.1
radical sam proteinATN89_23265Not AvailableNegative5115712 - 511686943355.0
nucleoside diphosphate kinase regulatorATN89_23270Not AvailablePositive5117224 - 511763114726.6
acyltransferaseATN89_23275Not AvailableNegative5117693 - 511886542933.1

Displaying genes 4621 – 4630 of 4791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0004885UDP-N-acetyl-alpha-D-mannosamineC17H25N3O17P2Chemical structure of UDP-N-acetyl-alpha-D-mannosamineNot available
Average605.34Da
Monoisotopic605.067017513Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC13579767
PeritonitisCausesPMC13579767
Wound infectionsCausesPMC13579767

Displaying health effects 1 – 3 of 3 in total