Comamonas thiooxydans strain PHE2-6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas thiooxydans strain PHE2-6 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This strain has been documented under the accession number LKFB00000000.1 and contains a single replicon, which is relevant for its genetic stability and replication processes. The presence of flagella suggests that C. thiooxydans strain PHE2-6 can navigate its environment, which may be beneficial for colonization and interaction with other microbial communities or substrates. This motility can enhance its ecological role, potentially allowing it to exploit various ecological niches. In terms of its biological significance, Comamonas thiooxydans is known for its ability to oxidize sulfur compounds, which plays a crucial role in the sulfur cycle. The strain's specific adaptations, such as its rod shape and flagellar motility, may facilitate its ecological interactions in environments where sulfur compounds are prevalent. Overall, the traits of Comamonas thiooxydans strain PHE2-6 highlight its potential contributions to microbial ecosystems, particularly in sulfur-rich environments, where it may participate in biogeochemical cycling and influence the dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas thiooxydans
Strainstrain PHE2-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge; human gut; human intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas thiooxydans strain PHE2-6 contig90089, whole genome

Gene Summary

Adenine Count

1024974 bp

Thymine Count

1017257 bp

Guanine Count

1618464 bp

Cytosine Count

1645883 bp

Genome Length

5306578 bp

Protein-coding Genes

4567 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-hydroxymuconic semialdehyde dehydrogenaseATN89_16545Not AvailableNegative3696985 - 369843952128.2
lysr family transcriptional regulatorATN89_16550Not AvailablePositive3698552 - 369944832777.7
cobalamin adenosyltransferaseATN89_16555Not AvailableNegative3699477 - 369992915114.3
meta-pathway phenol degradation-like proteinATN89_16560Not AvailableNegative3699939 - 370082931068.0
catechol 2,3-dioxygenaseATN89_16565Not AvailableNegative3701030 - 370197434946.6
ferredoxinATN89_16570Not AvailableNegative3701985 - 370235012802.5
phenol hydroxylase phcpATN89_16575Not AvailableNegative3702358 - 370343138683.1
phenol hydroxylase phcoATN89_16580Not AvailableNegative3703491 - 370384713076.6
phenol hydroxylase phcnATN89_16585Not AvailableNegative3703844 - 370545461829.7
phenol hydroxylase phcmATN89_16590Not AvailableNegative3705502 - 370579510728.4

Displaying genes 3481 – 3490 of 4791 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0004885UDP-N-acetyl-alpha-D-mannosamineC17H25N3O17P2Chemical structure of UDP-N-acetyl-alpha-D-mannosamineNot available
Average605.34Da
Monoisotopic605.067017513Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
BacteremiaCausesPMC13579767
PeritonitisCausesPMC13579767
Wound infectionsCausesPMC13579767

Displaying health effects 1 – 3 of 3 in total