Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilp | AO062_05035 | Not Available | Negative | 1100433 - 1100975 | 20201.4 |
| pilus assembly protein pilo | AO062_05040 | Not Available | Negative | 1100972 - 1101652 | 25317.4 |
| fimbrial protein | AO062_05045 | Not Available | Negative | 1101659 - 1102279 | 22935.8 |
| pilus assembly protein pilm | AO062_05050 | Not Available | Negative | 1102276 - 1103355 | 38959.7 |
| penicillin-binding protein | AO062_05055 | Not Available | Positive | 1103691 - 1106018 | 84378.8 |
| frataxin | AO062_05060 | Not Available | Negative | 1106043 - 1106375 | 12180.2 |
| diaminopimelate decarboxylase | AO062_05065 | Not Available | Positive | 1106656 - 1107933 | 45521.7 |
| sulfite oxidase | AO062_05070 | Not Available | Negative | 1107941 - 1108594 | 24489.9 |
| sulfoxide reductase catalytic subunit yedy | AO062_05075 | Not Available | Negative | 1108626 - 1109639 | 37501.0 |
| cytochrome c assembly protein | AO062_05080 | Not Available | Negative | 1109756 - 1111075 | 49208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
