Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | AO062_04985 | Not Available | Negative | 1085465 - 1086943 | 53785.1 |
| glutamate synthase | AO062_04990 | Not Available | Negative | 1086979 - 1091724 | 172442.0 |
| transposase | AO062_04995 | Not Available | Negative | 1091903 - 1092604 | 26157.2 |
| sam-dependent methyltransferase | AO062_05000 | Not Available | Negative | 1092634 - 1093515 | 32497.3 |
| peptidase | AO062_05005 | Not Available | Negative | 1093530 - 1094105 | 20990.7 |
| mfs transporter | AO062_05010 | Not Available | Negative | 1094102 - 1095382 | 43382.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | AO062_05015 | Not Available | Negative | 1095379 - 1096515 | 42590.4 |
| 3-dehydroquinate synthase | AO062_05020 | Not Available | Negative | 1096544 - 1097668 | 39731.4 |
| shikimate kinase | AO062_05025 | Not Available | Negative | 1097702 - 1098250 | 20097.1 |
| secretin | AO062_05030 | Not Available | Negative | 1098274 - 1100436 | 76188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
