Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine protein translocation system subunit tatc | AO062_04835 | Not Available | Negative | 1059812 - 1060630 | 29553.8 |
| preprotein translocase | AO062_04840 | Not Available | Negative | 1060704 - 1061165 | 16953.5 |
| preprotein translocase subunit tata | AO062_04845 | Not Available | Negative | 1061185 - 1061433 | 8635.39 |
| hit family hydrolase | AO062_04850 | Not Available | Negative | 1061499 - 1061858 | 13162.0 |
| hypothetical protein | AO062_04855 | Not Available | Negative | 1061848 - 1062237 | 14692.2 |
| phosphoribosyl-atp pyrophosphatase | AO062_04860 | Not Available | Negative | 1062263 - 1062652 | 13890.3 |
| phosphoribosyl-amp cyclohydrolase | AO062_04865 | Not Available | Negative | 1062649 - 1063038 | 14849.6 |
| imidazole glycerol phosphate synthase subunit hisf | AO062_04870 | Not Available | Negative | 1063081 - 1063866 | 27256.4 |
| aldose epimerase | AO062_04875 | Not Available | Negative | 1063889 - 1064722 | 30133.9 |
| c4-dicarboxylate abc transporter | AO062_04880 | Not Available | Positive | 1064855 - 1066162 | 46581.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
