Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | AO062_04775 | Not Available | Positive | 1045620 - 1046795 | 43796.4 |
| hypothetical protein | AO062_04780 | Not Available | Positive | 1046815 - 1048002 | 42487.2 |
| endonuclease | AO062_04785 | Not Available | Positive | 1048011 - 1048889 | 32117.4 |
| cytoplasmic protein | AO062_04790 | Not Available | Positive | 1048938 - 1050032 | 41340.2 |
| ligand-gated channel protein | AO062_04795 | Not Available | Positive | 1050419 - 1052527 | 76682.7 |
| riboflavin synthase subunit beta | AO062_04800 | Not Available | Positive | 1052897 - 1053409 | 18782.6 |
| glutathione s-transferase | AO062_04805 | Not Available | Positive | 1053451 - 1054152 | 25732.8 |
| arsenate reductase | AO062_04810 | Not Available | Positive | 1054184 - 1054564 | 14353.6 |
| epoxyqueuosine reductase | AO062_04815 | Not Available | Negative | 1054561 - 1055613 | 38755.2 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | AO062_04820 | Not Available | Positive | 1055629 - 1056123 | 17813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
