Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AO062_04465 | Not Available | Negative | 981362 - 982570 | 43200.3 |
| short-chain dehydrogenase | AO062_04470 | Not Available | Negative | 982636 - 983397 | 26505.3 |
| fatty-acid--coa ligase | AO062_04475 | Not Available | Negative | 983394 - 984956 | 56583.1 |
| hypothetical protein | AO062_04480 | Not Available | Negative | 985060 - 986853 | 64674.6 |
| hypothetical protein | AO062_04485 | Not Available | Positive | 987109 - 987708 | 21959.6 |
| hypothetical protein | AO062_04490 | Not Available | Negative | 987843 - 988793 | 35253.1 |
| udp-glucose 6-dehydrogenase | AO062_04495 | Not Available | Negative | 988929 - 990269 | 48059.6 |
| glycosyl transferase | AO062_04500 | Not Available | Positive | 990369 - 991397 | 36978.3 |
| hypothetical protein | AO062_04505 | Not Available | Positive | 991394 - 992392 | 35383.9 |
| hypothetical protein | AO062_04510 | Not Available | Positive | 992382 - 993143 | 28067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
