Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | AO062_04205 | Not Available | Negative | 903139 - 903675 | 19932.9 |
| hypothetical protein | AO062_04210 | Not Available | Negative | 903695 - 904150 | 16587.1 |
| cytoplasmic protein | AO062_04215 | Not Available | Negative | 904211 - 904456 | 8969.49 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AO062_04220 | Not Available | Negative | 904472 - 904792 | 11817.0 |
| hypothetical protein | AO062_04225 | Not Available | Negative | 904858 - 905160 | 11320.5 |
| methyltransferase | AO062_04230 | Not Available | Positive | 905269 - 905955 | 24667.5 |
| aminoglycoside phosphotransferase | AO062_04235 | Not Available | Negative | 905965 - 906981 | 36669.7 |
| hypothetical protein | AO062_04240 | Not Available | Negative | 907052 - 907336 | 10282.2 |
| peptidylprolyl isomerase | AO062_04250 | Not Available | Negative | 907976 - 908923 | 33686.2 |
| hypothetical protein | AO062_04255 | Not Available | Negative | 908920 - 909663 | 26190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
