Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpab | AO062_04105 | Not Available | Negative | 878369 - 879205 | 29081.4 |
| peptidase a24 | AO062_04110 | Not Available | Negative | 879239 - 879823 | 20350.6 |
| acyl-coa transferase | AO062_04115 | Not Available | Negative | 880197 - 881414 | 43438.1 |
| hypothetical protein | AO062_04120 | Not Available | Negative | 881414 - 882373 | 33182.8 |
| acyl-coa dehydrogenase | AO062_04125 | Not Available | Negative | 882417 - 883556 | 41494.1 |
| acyl-coa dehydrogenase | AO062_04130 | Not Available | Negative | 883553 - 884710 | 42257.4 |
| iclr family transcriptional regulator | AO062_04135 | Not Available | Positive | 884787 - 885617 | 30326.9 |
| rna polymerase subunit sigma | AO062_04140 | Not Available | Positive | 885762 - 886262 | 18580.5 |
| hypothetical protein | AO062_04145 | Not Available | Positive | 886259 - 887239 | 34950.5 |
| tonb-dependent receptor | AO062_04150 | Not Available | Positive | 887594 - 889858 | 81663.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
