Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpaf | AO062_04055 | Not Available | Negative | 870779 - 872149 | 50783.9 |
| histidine kinase | AO062_04060 | Not Available | Negative | 872192 - 873343 | 41182.3 |
| pilus assembly protein tade | AO062_04065 | Not Available | Negative | 873363 - 873791 | 15278.7 |
| pilus assembly protein tade | AO062_04070 | Not Available | Negative | 873788 - 874246 | 16177.6 |
| hypothetical protein | AO062_04075 | Not Available | Negative | 874252 - 875523 | 43800.9 |
| pilus assembly protein | AO062_04080 | Not Available | Negative | 875569 - 875745 | 6185.72 |
| hypothetical protein | AO062_04085 | Not Available | Negative | 875835 - 876020 | 6413.87 |
| pilus assembly protein pila | AO062_04090 | Not Available | Negative | 876111 - 876326 | 7424.23 |
| hypothetical protein | AO062_04095 | Not Available | Negative | 876465 - 876758 | 10092.1 |
| type ii and iii secretion system protein | AO062_04100 | Not Available | Negative | 876771 - 878345 | 53900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
