Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | AO062_04005 | Not Available | Positive | 858633 - 859028 | 14380.0 |
| hypothetical protein | AO062_04010 | Not Available | Negative | 859036 - 859704 | 24358.8 |
| hypothetical protein | AO062_04015 | Not Available | Negative | 859685 - 860347 | 23580.3 |
| hypothetical protein | AO062_04020 | Not Available | Negative | 860349 - 863171 | 99766.3 |
| hypothetical protein | AO062_04025 | Not Available | Negative | 863203 - 863904 | 25396.3 |
| calcium:proton antiporter | AO062_04030 | Not Available | Positive | 864892 - 866043 | 40153.5 |
| histidine kinase | AO062_04035 | Not Available | Positive | 866391 - 868079 | 61430.4 |
| luxr family transcriptional regulator | AO062_04040 | Not Available | Positive | 868112 - 868807 | 25321.7 |
| type ii secretion system protein | AO062_04045 | Not Available | Negative | 868850 - 869767 | 33164.5 |
| pilus assembly protein tadb | AO062_04050 | Not Available | Negative | 869780 - 870769 | 36762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
