Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | AO062_03805 | Not Available | Negative | 800081 - 800818 | 25955.0 |
| thiamine biosynthesis protein thij | AO062_03810 | Not Available | Positive | 801023 - 801670 | 22784.4 |
| damage-inducible protein | AO062_03815 | Not Available | Positive | 801751 - 802263 | 17777.2 |
| hypothetical protein | AO062_03820 | Not Available | Positive | 802260 - 802706 | 16556.8 |
| hypothetical protein | AO062_03825 | Not Available | Negative | 802734 - 803738 | 35323.2 |
| citryl-coa lyase | AO062_03830 | Not Available | Negative | 803769 - 804659 | 30382.4 |
| coa-transferase | AO062_03835 | Not Available | Negative | 804656 - 805837 | 42192.3 |
| acyl-coa dehydrogenase | AO062_03840 | Not Available | Negative | 805862 - 806752 | 32601.8 |
| laci family transcriptional regulator | AO062_03845 | Not Available | Negative | 806788 - 807798 | 34765.2 |
| lysr family transcriptional regulator | AO062_03850 | Not Available | Positive | 807891 - 808802 | 33399.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
