Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO062_03655 | Not Available | Negative | 767742 - 768635 | 32712.9 |
| nad(p)h dehydrogenase | AO062_03660 | Not Available | Positive | 768724 - 769542 | 30193.9 |
| hypothetical protein | AO062_03665 | Not Available | Positive | 769638 - 770027 | 14465.2 |
| helicase snf2 | AO062_03670 | Not Available | Negative | 770154 - 770534 | 12624.8 |
| aminoglycoside phosphotransferase | AO062_03675 | Not Available | Negative | 770781 - 771590 | 29056.5 |
| multidrug transporter | AO062_03680 | Not Available | Negative | 771594 - 771929 | 11739.6 |
| cupin | AO062_03685 | Not Available | Negative | 771992 - 772525 | 18445.4 |
| dtdp-glucose 4,6-dehydratase | AO062_03690 | Not Available | Negative | 772522 - 773265 | 25495.6 |
| dna-binding protein | AO062_03695 | Not Available | Positive | 773362 - 774783 | 50809.3 |
| atp-dependent dna ligase | AO062_03700 | Not Available | Negative | 774787 - 775599 | 28871.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
