Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | AO062_03455 | Not Available | Negative | 725751 - 727916 | 78111.9 |
| gntr family transcriptional regulator | AO062_03460 | Not Available | Positive | 728047 - 728694 | 24042.0 |
| iclr family transcriptional regulator | AO062_03465 | Not Available | Negative | 728834 - 729619 | 27964.7 |
| pp_00684 | AO062_03470 | Not Available | Negative | 729784 - 730779 | Not Available |
| hypothetical protein | AO062_03475 | Not Available | Negative | 730811 - 731596 | 28003.7 |
| acetoacetate decarboxylase | AO062_03480 | Not Available | Negative | 731673 - 732470 | 28244.7 |
| histidine kinase | AO062_03485 | Not Available | Positive | 732707 - 733090 | 13950.3 |
| 4-aminobutyrate aminotransferase | AO062_03490 | Not Available | Negative | 733095 - 734384 | 45535.0 |
| 6-aminohexanoate hydrolase | AO062_03495 | Not Available | Negative | 734420 - 735658 | 44873.2 |
| hypothetical protein | AO062_03500 | Not Available | Negative | 735675 - 736622 | 36555.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
