Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | AO062_03300 | Not Available | Positive | 694425 - 695516 | 40896.3 |
| hypothetical protein | AO062_03305 | Not Available | Positive | 695513 - 696466 | 34410.3 |
| hypothetical protein | AO062_03310 | Not Available | Positive | 696492 - 697448 | 34901.0 |
| polysaccharide biosynthesis protein | AO062_03315 | Not Available | Positive | 697445 - 698713 | 44789.4 |
| glycosyl transferase | AO062_03320 | Not Available | Positive | 698710 - 699981 | 45376.3 |
| udp-glucose 4-epimerase | AO062_03325 | Not Available | Positive | 699978 - 701087 | 39540.0 |
| luxr family transcriptional regulator | AO062_03330 | Not Available | Positive | 701128 - 701874 | 27314.0 |
| mannose-1-phosphate guanyltransferase | AO062_03335 | Not Available | Positive | 701935 - 703422 | 53213.5 |
| gdp-mannose 4,6-dehydratase | AO062_03340 | Not Available | Positive | 703458 - 704495 | 39137.5 |
| dna polymerase iii subunit epsilon | AO062_03350 | Not Available | Negative | 704765 - 705472 | 25897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
