Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline biosynthesis protein | AO062_30835 | Not Available | Positive | 6734173 - 6735705 | 56650.9 |
| 6-phosphogluconolactonase | AO062_30840 | Not Available | Positive | 6735724 - 6736983 | 43844.0 |
| d-aminoacylase | AO062_30845 | Not Available | Negative | 6736991 - 6738460 | 52800.5 |
| rpir family transcriptional regulator | AO062_30850 | Not Available | Negative | 6738457 - 6739374 | 32376.8 |
| 3-oxoacyl-acp reductase | AO062_30860 | Not Available | Negative | 6740279 - 6741049 | 26942.2 |
| pseudouridine synthase | AO062_30865 | Not Available | Negative | 6741138 - 6742070 | 35085.1 |
| protein kinase | AO062_30870 | Not Available | Negative | 6742067 - 6743383 | 46640.1 |
| zn-dependent hydrolase | AO062_30875 | Not Available | Negative | 6743496 - 6744554 | 39323.4 |
| merr family transcriptional regulator | AO062_30880 | Not Available | Positive | 6744649 - 6745092 | 16432.7 |
| carbonate dehydratase | AO062_30885 | Not Available | Positive | 6745105 - 6745839 | 26679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
