Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidyl-trna synthase | AO062_03050 | Not Available | Negative | 623749 - 625059 | 48069.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | AO062_03055 | Not Available | Negative | 625075 - 626355 | 45958.3 |
| hypothetical protein | AO062_03060 | Not Available | Negative | 626352 - 627275 | 31446.0 |
| pilus assembly protein pilw | AO062_03065 | Not Available | Negative | 627268 - 628119 | 31048.6 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | AO062_03070 | Not Available | Negative | 628124 - 629293 | 43159.0 |
| nucleoside diphosphate kinase | AO062_03075 | Not Available | Negative | 629315 - 629740 | 15267.3 |
| pseudouridine synthase | AO062_03080 | Not Available | Negative | 629893 - 631740 | 65163.1 |
| segregation and condensation protein b | AO062_03085 | Not Available | Negative | 631737 - 632672 | 33378.8 |
| pseudouridine synthase | AO062_03090 | Not Available | Negative | 632801 - 633808 | 36334.7 |
| competence protein coml | AO062_03095 | Not Available | Positive | 633841 - 634650 | 30292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
