Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | AO062_00275 | Not Available | Positive | 53382 - 54971 | 57371.5 |
| abc transporter permease | AO062_00280 | Not Available | Positive | 54985 - 55950 | 35027.9 |
| abc transporter permease | AO062_00285 | Not Available | Positive | 55971 - 56912 | 33462.4 |
| abc transporter atp-binding protein | AO062_00290 | Not Available | Positive | 56909 - 58669 | 63516.8 |
| hypothetical protein | AO062_00295 | Not Available | Negative | 58677 - 60578 | 69371.9 |
| hypothetical protein | AO062_00300 | Not Available | Negative | 60575 - 61588 | 37739.5 |
| gcn5 family acetyltransferase | AO062_00305 | Not Available | Negative | 61649 - 64342 | 96401.3 |
| homoserine dehydrogenase | AO062_00310 | Not Available | Positive | 64662 - 66023 | 46912.7 |
| hypothetical protein | AO062_00315 | Not Available | Negative | 66031 - 66513 | 17268.2 |
| glutamine amidotransferase | AO062_00320 | Not Available | Negative | 66510 - 67202 | 24826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
